PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0113s0053.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 283aa    MW: 32303.9 Da    PI: 6.0137
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0113s0053.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix43.49.1e-1442126280
             trihelix   2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                          Wt  e ++L +a+re++e+  ++      k+++ +W+++ ++++++ +ers++qC+++we ++ ++kk+ + ek+   + +s ++
  Mapoly0113s0053.1.p  42 WTLTELQVLQTAKREDQEKQLKAdpkekhKSAAERWQWIEDYCWDQRVERSAQQCRDRWERMSADFKKVGDFEKQVPRGGTSYWQ 126
                          ************99776665543233333699*****************************************998666666664 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.94638104IPR017877Myb-like domain
PfamPF138374.2E-940126No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MTGLHSLSDG LHTSDGKKPD DDIVMEEREG PRHGRVYKKS NWTLTELQVL QTAKREDQEK  60
QLKADPKEKH KSAAERWQWI EDYCWDQRVE RSAQQCRDRW ERMSADFKKV GDFEKQVPRG  120
GTSYWQMTID DRKTKKLPSN FQQEIFHALG EWFVRSRAVD PNDIVIDTSV PSPLQVNNAC  180
VNLVSNGDNS SSEEGESDPQ DGPTTCKKRK LPPGVNAEGI AAIIERANMA TQRTMLECED  240
RKDRRHKETL EANERIASGY ISALVSIADA LRQFATNRDD RE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18811637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-22Trihelix family protein